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Position: Home > Articles > Establishment of inter -simple sequence repeat reaction system in Castanea henryi Journal of Fruit Science 2009,26 (1) 103-107

锥栗自然居群ISSR-PCR分析技术的建立

作  者:
刘国彬;龚榜初;罗正荣
单  位:
中国林业科学研究院亚热带林业研究所;华中农业大学园艺植物生物学教育部重点实验室
关键词:
锥栗;自然居群;ISSR
摘  要:
提取野生锥栗的基因组DNA作为ISSR-PCR模板,对反应体系中的模板用量、Mg2+浓度、dNTPs浓度、引物浓度和TaqDNA聚合酶用量5个主要影响因素进行梯度试验,并对扩增程序中的退火温度与循环次数进行了探讨,初步确立了适合野生锥栗的ISSR-PCR分析技术体系,即25μL反应体系中,模板DNA40或50ng、Mg2+2.25mmol.L-1、dNTPs0.2mmol.L-1、引物0.2μmol.L-1、TaqDNA聚合酶1.0U;PCR扩增程序为:94℃预变性3min;然后94℃变性45s,(Tm+2~4℃)退火45s,72℃延伸2min,共32个循环;最后72℃充分延伸5min;1.5%琼脂糖凝胶电泳分离扩增产物。
译  名:
Establishment of inter -simple sequence repeat reaction system in Castanea henryi
作  者:
LIU Guo-bin1,2,GONG Bang-chu1*,LUO Zheng-rong2 (1Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400 China; 2Key Laboratory for Horticul- tural Plant Biology, Ministry of Education, Huazhong Agricultural University, Hubei, Wuhan 430070 China)
关键词:
Castanea henryi; Natural population; ISSR
摘  要:
In order to investigate the genetic diversity and relationship within and among Castanea henryi, Zhejiang and Huangshan natural C. henryi were subjected to inter-simple sequence repeat (ISSR-PCR) analysis. Genomic DNA of C. hen- ryi was extracted from leaves as the template, the mainly influencing factors of ISSR were studied and the experiment param- eters were optimized. By adjusting the concentration of template DNA, Mg2+, dNTPs, primer and the contents of Taq DNA polymerase, the PCR amplification system were optimized; Then we also optimized the amplified program, including the an- nealing temperature and PCR cycles, the PCR amplification conditions were established, finally. The optimal experiment conditions were as follow: 25 μL reaction system containing 40 or 50 ng template DNA, 2.25 mmol·L-1 Mg2+, 0.2 mmol·L-1 dNTPs, 1.0 U Taq DNA polymerase, 0.2 μmol·L-1 primer; with a ABI thermal cycle, the optimal amplification program was an initial denature for 3 min at 94 ℃, followed by 32 cycles of 45 s at 94 ℃, 45 s at Tm+2~4 ℃, 2 min at 72 ℃, and a final extension for 5 min at 72 ℃.

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