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甜菜蛋白磷酸酶超家族分析

作  者:
邹奕;闫彩燕;邳植
关键词:
甜菜;蛋白磷酸酶;系统进化树;层次聚类分析
摘  要:
蛋白磷酸酶催化的蛋白质去磷酸化作用是蛋白质可逆磷酸化修饰过程的重要一环,对植物生长发育调节和逆境应答具有重要意义。本研究利用生物信息学手段对甜菜蛋白磷酸酶超家族进行初步分析,从甜菜基因组中共筛选出143个蛋白磷酸酶,构建甜菜磷酸酶超家族系统进化树,并与其他物种磷酸酶超家族进行比较分析。结果表明,甜菜磷酸酶家族成员分布与衣藻、红藻和小立碗藓等孢子植物相近,CDC14、CDC25和MDP1家族数目相对于其他物种也具有一定优势。为进一步了解蛋白质磷酸化修饰如何参与调控甜菜生长发育提供了必要的理论基础。
译  名:
Analysis of Sugar Beet Protein Phosphatase Superfamily
作  者:
ZOU Yi;YAN Cai-yan;PI Zhi;Key Laboratory of Sugar Beet Genetic Breeding, College of Heilongjiang Province;Sugar Beet Research Institute of Chinese Academy of Agricultural Sciences/Crop Academy of Heilongjiang University;KeyLaboratory of North Sugar Crop Resource and Utilization, Chinese Academy of Agricultural Sciences;
单  位:
ZOU Yi%YAN Cai-yan%PI Zhi%Key Laboratory of Sugar Beet Genetic Breeding, College of Heilongjiang Province%Sugar Beet Research Institute of Chinese Academy of Agricultural Sciences/Crop Academy of Heilongjiang University%KeyLaboratory of North Sugar Crop Resource and Utilization, Chinese Academy of Agricultural Sciences
关键词:
sugar beet;;protein phosphatase;;phylogenetic tree;;hierarchical cluster analysis
摘  要:
Protein dephosphorylation catalyzed by protein phosphatase is an essential part of protein reversible phosphorylation process, which plays important role in regulation of plant growth and development as well as stress response. In this study, the protein phosphatase genes in sugar beet were identified based on bioinformatics analysis. A total of 143 protein phosphatases were screened from the sugar beet genome. Subsequently, the construction of phosphatase phylogenetic tree and the comparison with other species was processed. Our results showed that the distribution of protein phosphatase family in sugar beet was similar to that of cryptogam, such as Chlamydomonas reinhardtii, Cyanidioschyzon merolae and Physcomitrella patens. The larger number of CDC14,CDC25 and MDP1 genes was also identified in sugar beet compare with the other species. It provided a theoretical basis for further understanding how phosphorylation participated in the regulation of growth and development in sugar beet.

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