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Rice bioinformatics in the genomic era: Status and perspectives

作  者:
Jia Lu;Lihong Xie;Sangting Lao;Qian Zhu;Longjiang Fa
单  位:
Institute of Crop Science & Institute of Bioinformatics, Zhejiang University, Hangzhou 310058, Zhejiang, China;Hainan Institute of Zhejiang University, Yonyou Industrial Park, Sanya 572025, Hainan, Chin;Hainan Institute of Zhejiang University, Yonyou Industrial Park, Sanya 572025, Hainan, China;CSIRO Agriculture and Food, Black Mountain Laboratories, GPO Box 1700, Canberra, ACT 2601, Australia
关键词:
Rice;Bioinformatics;Genomic data;Database;Too
摘  要:
Rice is one of cereal crops and a model species for monocots. Since the release of the first draft rice genome sequences in 2002, considerable progress has been achieved in rice genomic researches, thanks to rapid development and efficient utilization of bioinformatics methods and tools. In this review, we summarize the progress of studies of rice genome sequencing and other omics and introduce the well-maintained bioinformatics databases and tools developed for rice genome resources and breeding. After reviewing the history of rice bioinformatics, we use single-cell sequencing and machine learning as examples showing how bioinformatics integrates emerging technologies and how it continues to develop for future rice research. (C) 2021 Crop Science Society of China and Institute of Crop Science, CAAS. Production and hosting by Elsevier B.V. on behalf of KeAi Communications Co., Ltd.

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