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Position: Home > Articles > Transcriptome Analysis of Female and Male Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae) Identifies Sex-related Genes Horticultural Plant Journal 2021,7 (2)

Transcriptome Analysis of Female and Male Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae) Identifies Sex-related Genes

作  者:
Wei Guo;Kebin Liu;Jiaqi Yu;Jing Lü;Xiaoguo Jiao;Lan Kong;Chunxiao Yang;Huipeng Pa
单  位:
Key Laboratory of Bio-Pesticide Innovation and Application of Guangdong Province, Engineering Technology Research Center of Agricultural Pest Biocontrol of Guangdong Province, South China Agricultural University, Guangzhou 510642, Chin;Department of Computer Science, Eastern Kentucky University, Richmond KY 40475, USA;State Key Laboratory of Biocatalysis and Enzyme Engineering, Center for Behavioral Ecology & Evolution, School of Life Sciences, Hubei University, Wuhan 430062, China;State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou 510642, China;Key Laboratory of Bio-Pesticide Innovation and Application of Guangdong Province, Engineering Technology Research Center of Agricultural Pest Biocontrol of Guangdong Province, South China Agricultural University, Guangzhou 510642, China
关键词:
Henosepilachna vigintioctopunctata;sex;RNA-seq;transcriptome annotation;differential expressio
摘  要:
Henosepilachna vigintioctopunctata is an emerging horticultural pest of Solanaceae plants in Asia. Here, we employed transcriptome sequencing of three female and three male H. vigintioctopunctata libraries to identify sex-related genes. We recorded 281 599 294 bp of clean reads, and de novo assembly generated 85 206 unigenes, with N50 of 1 311 bp and average length of 763 bp. We found 5 002 genes highly expressed in males and 2 179 genes highly expressed in females. Expression profiles of six unigenes specific to females, six unigenes specific to males, and ten unigenes common to both sexes were verified using semi-quantitive RT-PCR; results showed expression levels of these 22 unigenes were relatively consistent with the transcriptome analysis. Using all unigenes as references, we identified 6 657 putative simple sequence repeats. The transcriptome sequences and gene expression profiles of female and male H. vigintioctopunctata help explore genetic mechanisms of sexual dimorphism.
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